| Title || WgSim |
| Short Description || a small tool for simulating sequence reads from a reference genome. |
| Long Description || Wgsim is a small tool for simulating sequence reads from a reference genome.
It is able to simulate diploid genomes with SNPs and insertion/deletion (INDEL)
polymorphisms, and simulate reads with uniform substitution sequencing errors.
It does not generate INDEL sequencing errors, but this can be partly
compensated by simulating INDEL polymorphisms.
Wgsim outputs the simulated polymorphisms, and writes the true read coordinates
as well as the number of polymorphisms and sequencing errors in read names.
One can evaluate the accuracy of a mapper or a SNP caller with wgsim_eval.pl
that comes with the package. |
| Last Release || 8 years, 1 month ago |
This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification.
|Author verification||The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.|