A software tool to generate data of related sequences along a given phylogeny, taking into account user defined system of neighbourhoods and instantaneous rate matrices. Long Description (required)
Simulating Site-Specific Interactions (SISSI) that simulatesevolution of a nucleotide sequence along a phylogenetic tree incorporating user defined site-specific interactions. Furthermore, our method allows to simulate more complex interactions among nucleotide and other character based sequences http://www.cibiv.at/software/sissi/
Step 1: Use the attribute tree to add new attributes or remove pre-selected attributes to describe the simulator.
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Summary of Proposed Changes Step 2: Review list of proposed attribute addition(s) and subtraction(s).
Can't Find the Attribute You Are Looking For? If you would like to propose an attribute that you cannot find in the tree above, or if you would like to add a clarification to one or more attributes for this simulator (e.g. a specific file format for attribute /Output/File Format/Other), please list them in the Additional Comment box of the Submit tab .
Summary of Proposed Changes Current Citations/Applications
[Pubmed ID: 16332711 ],
Gesell T, von Haeseler A ,
In silico sequence evolution with site-specific interactions along phylogenetic trees. ,
Bioinformatics ,
03-15-2006 ,
https://www.ncbi.nlm.nih.gov/pubmed/?term=16332711, Primary Citation