simuPOP

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Title simuPOP
Short Description simuPOP is a general-purpose individual-based forward-time population genetics simulation environment.
Long Description simuPOP is a general-purpose individual-based forward-time population genetics simulation environment. The core of simuPOP is a scripting language (Python) that provides a large number of objects and functions to manipulate populations, and a mechanism to evolve populations forward in time. Using this environment, users can create, manipulate and evolve populations interactively, or write a script and run it as a batch file. Owing to its flexible and extensible design, simuPOP can simulate large and complex evolutionary processes with ease.
Version 1.1.7
Project Started 2005
Last Release 1 year, 4 months ago
Homepagehttp://simupop.sourceforge.net/
Citations
  • Peng B, Amos CI, Forward-time simulations of non-random mating populations using simuPOP., Bioinformatics, June 1, 2008 [Abstract, cited in PMC ]
  • Peng B, Kimmel M, simuPOP: a forward-time population genetics simulation environment., Bioinformatics, Sept. 15, 2005 [Abstract, cited in PMC ]
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Last certifiedFeb. 1, 2016 (478 days ago)
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