Attribute Category | Attribute | Target | |
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Type of Simulated Data | Diploid DNA Sequence,
Haploid DNA Sequence,
Sex Chromosomes,
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Variations | Biallelic Marker,
Multiallelic Marker,
Single Nucleotide Variation,
Insertion and Deletion,
Other (Large-scale insertions and deletions),
|
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Simulation Method | Forward-time,
Other (Rejection sampling to simulate data conditional on terminal frequency.),
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Input | |
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Data Type | Allele Frequencies,
Other (Recombination rate variation),
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File format | MS,
STRUCTURE,
Program Specific,
Other (Fasta),
|
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Output | |
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Data Type | Genotype or Sequence,
Demographic,
Mutation,
Diversity Measures,
Fitness,
|
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Sequencing Reads | Other (Coding or noncoding, sex/autosomal),
|
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File Format | Fasta or Fastq,
MS,
STRUCTURE,
Program Specific,
Other (Various),
|
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Sample Type | Random or Independent,
|
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Phenotype | |
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Trait Type | |
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Determinants | |
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Evolutionary Features | |
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Demographic | |
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Population Size Changes | Constant Size,
Exponential Growth or Decline,
Logistic Growth,
Bottleneck,
Carrying Capacity,
User Defined,
|
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Gene Flow | Stepping Stone Models,
Island Models,
Continent-Island Models,
Sex or Age-Specific Migration Rates,
Admixed Population,
User-defined Matrix,
Other (Various),
|
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Spatiality | |
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Life Cycle | Discrete Generation Model,
User-Defined transition matrices,
|
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Mating System | Random Mating,
Polygamous,
Haplodiploid,
Selfing,
Other (Arbitrary poidy),
|
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Fecundity | Constant Number,
Individually Determined,
|
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Natural Selection | |
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Determinant | Single-locus,
Multi-locus,
Codon-based,
Fitness of Offspring,
|
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Models | Directional Selection,
Balancing Selection,
Multi-locus models,
Random Fitness Effects,
Phenotype Threshold,
Other (Various),
|
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Recombination | Uniform,
Varying Recombination Rates,
Gene Conversion Allowed,
|
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Mutation Models | Two-allele Mutation Model,
Markov DNA Evolution Models,
Infinite-allele Model,
Codon and Amino Acid Models,
Indels and Others,
Heterogeneity among Sites,
Others,
|
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Events Allowed | Population Merge and Split,
Varying Demographic Features,
Population Events,
Varying Genetic Features,
Change of Mating Systems,
Other (Various),
|
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Other | |
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Interface | Command-line,
Script-based,
Web-based,
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Development | |
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Tested Platforms | Windows,
Mac OS X,
Linux and Unix,
Solaris,
Others,
|
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Language | C or C++,
|
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License | GNU Public License,
BSD,
|
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GSR Certification | Accessibility,
Documentation,
Application,
Support,
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