Recodon

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Title Recodon
Short Description Coalescent simulation of coding DNA sequences with recombination, migration and demography
Long Description Recodon can simulate samples of coding DNA sequences under complex scenarios in which several evolutionary forces can interact simultaneously (namely, recombination, migration and demography). The basic codon model implemented is an extension to the general time-reversible model of nucleotide substitution with a proportion of invariable sites and among-site rate variation. In addition, the program implements non-reversible processes and mixtures of different codon models.
Version 1.6.0
Project Started 2009
Last Release 11 years, 8 months ago
Homepagehttps://github.com/MiguelArenas/recodon
Citations Arenas M, Posada D, Recodon: coalescent simulation of coding DNA sequences with recombination, migration and demography., BMC Bioinformatics, Nov. 20, 2007 [Abstract, cited in PMC ]
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Last evaluatedMarch 12, 2020 (175 days ago)
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