Coalescent simulation of coding DNA sequences with recombination (inter and intracodon), migration and demography Long Description (required)
NetRecodon is a population genetic simulator that generates samples of nucleotide and codon sequences from haploid/diploid populations with inter and intracodon recombination, migration, growth and dated tips. It can also run in several processors using MPI.
Operative systems
Source code and a makefile are provided for compilation in any OS with a C compiler, along with some compiled executables. http://code.google.com/p/netrecodon/
Step 1: Use the attribute tree to add new attributes or remove pre-selected attributes to describe the simulator.
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Summary of Proposed Changes Step 2: Review list of proposed attribute addition(s) and subtraction(s).
Can't Find the Attribute You Are Looking For? If you would like to propose an attribute that you cannot find in the tree above, or if you would like to add a clarification to one or more attributes for this simulator (e.g. a specific file format for attribute /Output/File Format/Other), please list them in the Additional Comment box of the Submit tab .
Summary of Proposed Changes Current Citations/Applications
[Pubmed ID: 19933876 ],
Arenas M, Posada D ,
Coalescent simulation of intracodon recombination. ,
Genetics ,
02-01-2010 ,
https://www.ncbi.nlm.nih.gov/pubmed/?term=19933876, Primary Citation