HAPGEN

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Title HAPGEN
Short Description A simulator for the simulation of case control datasets at SNP markers
Long Description HAPGEN2 is a an updated version of the program HAPGEN, which simulates case control datasets at SNP markers. The new version can now simulate multiple disease SNPs on a single chromosome, on the assumption that each disease SNP acts independently and are in Hardy-Weinberg equilibrium. We also supply a R package that can simulate interaction between the disease SNPs. We hope to add further facilities to simulate quantitive traits and admixture soon.
Version 2.1.2
Project Started 2010
Last Release 7 years, 6 months ago
Homepagehttps://mathgen.stats.ox.ac.uk/genetics_software/hapgen/hapgen2.html
Citations Su Z, Marchini J, Donnelly P, HAPGEN2: simulation of multiple disease SNPs., Bioinformatics, Aug. 15, 2011 [Abstract, cited in PMC ]
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