HAP-SAMPLE

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Title HAP-SAMPLE
Short Description An association simulator for candidate regions or genome scans
Long Description HAP-SAMPLE is a web application for simulating SNP genotypes for case-control and affected-child trio studies by resampling from Phase I/II HapMap SNP data. The user provides a list of SNPs to be "genotyped," along with a disease model file that describes causal SNPs and their effect sizes. The simulation tool is appropriate for candidate regions or whole-genome scans. The stand-alone software is also available.
Version 0.12
Project Started 2007
Last Release 11 years, 6 months ago
Homepagehttps://sites.google.com/a/umich.edu/leeshawn/software
Citations Wright FA, Huang H, Guan X, Gamiel K, Jeffries C, Barry WT, de Villena FP, Sullivan PF, Wilhelmsen KC, Zou F, Simulating association studies: a data-based resampling method for candidate regions or whole genome scans., Bioinformatics, Oct. 1, 2007 [Abstract, cited in PMC ]
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