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Basic Package Attributes
Title BAMSurgeon
Short Description Methods for realistic simulation of mutations in real data.
Long Description BAMSurgeon can add SNVs, INDELs, and several forms of structural variant (SV) to existing BAM files and using multiple alignment methods, which is useful for testing mutation detection software in a variety of contexts.
Version 1.0
Project Started 2012
Last Release 5 years, 1 month ago
Citations Ewing AD, Houlahan KE, Hu Y, Ellrott K, Caloian C, Yamaguchi TN, Bare JC, P'ng C, Waggott D, Sabelnykova VY, Kellen MR, et al., Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection., Nat Methods, July 1, 2015 [Abstract, cited in PMC ]
GSR CertificationGSR-certifiedAccessibility
Last evaluatedNov. 10, 2017 (1028 days ago)
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
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