ART

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Title ART
Short Description ART is a set of simulation tools to generate synthetic next-generation sequencing data by mimicking real sequencing process with empirical error models or quality profiles.
Long Description ART is a set of simulation tools to generate synthetic next-generation sequencing data by mimicking real sequencing process with empirical error models or quality profiles. ART supports simulation of single-end, paired-end and mate-pair reads of three major commercial next-generation sequencing platforms: Illumina's Solexa, Roche's 454 and Applied Biosystems' SOLiD. ART can perform regular genome sequencing simulation as well amplicon sequencing simulation. ART is implemented in C++ with optimized algorithms and is highly efficient in read simulation. ART outputs reads in the FASTQ format, and alignments in the ALN/MAP and/or SAM format. ART can also generate alignments in UCSC BED file format.
Version ART-MountRainier-2016-06-05
Project Started 2011
Last Release 1 year, 5 months ago
Homepagehttp://www.niehs.nih.gov/research/resources/software/biostatistics/art/
Citations Huang W, Li L, Myers JR, Marth GT, ART: a next-generation sequencing read simulator., Bioinformatics, Feb. 15, 2012 [Abstract, cited in PMC ]
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Last certifiedJan. 9, 2017 (310 days ago)
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