GSR: Simulator - AlphaDrop
The AlphaDrop package is not yet public.
Attribute | Value |
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Title | AlphaDrop |
Short Description | simple software package for simulating genomic selection or GWAS data. |
Long Description | AlphaDrop is a very simple software package for simulating genomic selection or GWAS data. It simply drops simulated haplotypes through a pedigree. The haplotypes are simulated using MaCS (Chen et al., 2009). AlphaDrop can simulate sequence and SNP data, pedigrees, QTL effects, and breeding values. Pre-specified pedigrees can also be supplied. |
Homepage | https://sites.google.com/site/hickeyjohn/alphadrop |
Citations | |
GSR Certification | This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification. |
Author verification | The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator. |
Attribute Category | Attribute |
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Target | |
Type of Simulated Data | |
Variations | |
Simulation Method | |
Input | |
Data Type | |
File format | |
Output | |
Data Type | |
Sequencing Reads | |
File Format | |
Sample Type | |
Phenotype | |
Trait Type | |
Determinants | |
Evolutionary Features | |
Demographic | |
Population Size Changes | |
Gene Flow | |
Spatiality | |
Life Cycle | |
Mating System | |
Fecundity | |
Natural Selection | |
Determinant | |
Models | |
Recombination | |
Mutation Models | |
Events Allowed | |
Other | |
Interface | |
Development | |
Tested Platforms | |
Language | |
License | |
GSR Certification |
Number of Primary Citations: 0
Number of Non-Primary Citations: 0
No example publication using AlphaDrop has been provided.
Please propose new citations if you are aware of publications that use this software.