GSR: Simulator - 454sim

Basic Package Attributes
AttributeValue
Title 454sim
Short Description Simulate 454-data using configurable statistical models at high speed
Long Description Simulate 454-data using configurable statistical models at high speed
Homepagehttps://sourceforge.net/projects/bioinfo-454sim/
Citations Lysholm F, Andersson B, Persson B, An efficient simulator of 454 data using configurable statistical models., BMC Res Notes, 10-26-2011 [ Abstract, cited in PMC ]
GSR Certification

Accessibility
Documentation
Application
Support

Last evaluated01-18-2023 (324 days ago)
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
Detailed Attributes
Attribute CategoryAttribute
Target
Type of Simulated DataSequencing Reads,
Variations
Simulation MethodResample Existing Data,
Input
Data Type
File format
Output
Data Type
Sequencing ReadsRoche 454,
File FormatFasta or Fastq,
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
Interface
Development
Tested PlatformsWindows, Mac OS X, Linux and Unix,
LanguageC or C++,
License
GSR CertificationAccessibility, Documentation,

Number of Primary Citations: 1

Number of Non-Primary Citations: 0

No example publication using 454sim has been provided.

Please propose new citations if you are aware of publications that use this software.


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